GitHub

GNODEVAE: A Graph-Based ODE-VAE Enhances Clustering of Single-Cell Data

GNODEVAE is an innovative computational framework that integrates Graph Attention Networks (GAT), Neural Ordinary Differential Equations (NODE), and Variational Autoencoders (VAE). It addresses three ...
Frontiers

Structure-guided integrative soft deep clustering analysis of scRNA-seq and scATAC-seq data

1 Department of Urology, The First Hospital of China Medical University, Shenyang, China 2 Department of Epidemiology, School of Public Health, China Medical University, Shenyang, China Introduction: ...
Live Science

Quantum 'miracle material' can store information in a single dimension thanks to newly discovered magnetic switching

Scientists have developed a method for storing quantum information in a single dimension, thereby reducing decoherence, using chromium sulfide bromide. When you purchase through links on our site, we ...
GitHub

A Global Structure-Aware NMF Algorithm for Single-Cell RNA-seq Clustering

This project constructed a nonnegative matrix factorization model integrating two scRNA-seq. This model is called the Integrated Nonnegative Low Rank Matrix Factorization (INLRMF), which can ...
IEEE

DIC: Deep Imputing and Clustering Single Cell RNA Sequencing Data

Abstract: It is notorious that single-cell RNA sequencing (scRNA-seq) data contain a significant number of missing values due to technical variability. The issue of missing values presents a major ...
Microsoft

Scalable nonparametric clustering with unified marker gene selection for single-cell RNA-seq data

Clustering is commonly used in single-cell RNA-sequencing (scRNA-seq) pipelines to characterize cellular heterogeneity. However, current methods face two main limitations. First, they require ...
Frontiers

SCDRHA: A scRNA-Seq Data Dimensionality Reduction Algorithm Based on Hierarchical Autoencoder

1 College of Mathematics and System Sciences, Xinjiang University, Ürümqi, China 2 Key Lab of Intelligent Computing and Signal Processing of Ministry of Education, School of Artificial Intelligence, ...